Staff Profile
Emmett Duffy Photo

Biography

Emmett Duffy is Director of the Smithsonian’s Tennenbaum Marine Observatories Network, which coordinates the developing MarineGEO program. MarineGEO is building a worldwide partnership to administer an annual health exam for coastal marine life: documenting how and why coastal sea life is changing, and how that change affects resilience of the marine ecosystems humans depend on. The research focuses on biological diversity as the heart of healthy marine ecosystems and how they respond together to global change. Duffy is a marine biologist who has worked in seagrass and coral reef ecosystems around the world. He has contributed to scientific syntheses linking biodiversity to ecosystem health, the US National Climate Assessment, and visioning for development of an international Marine Biodiversity Observation Network. He was awarded an Aldo Leopold Leadership Fellowship in 2006, Japan’s inaugural Kobe Prize in Marine Biology in 2011, and a Virginia Outstanding Faculty award in 2013. Duffy came to the Smithsonian in 2013 after 19 years at the College of William and Mary’s Virginia Institute of Marine Science. 

Publications (Google Scholar)

Publications

  • Dang, Pengfei ; Zhang, Miaomiao ; Chen, Xinli ; Loreau, Michel ; Duffy, J. E. ; Li, Xin'e ; Wen, Shuyue ; Han, Xiaoqing ; Liao, Lechen ; Huang, Tiantian ; Wan, Chenxi ; Qin, Xiaoliang ; Siddique, Kadambot H. M. ; Schmid, Bernhard. (2024). Plant diversity decreases greenhouse gas emissions by increasing soil and plant carbon storage in terrestrial ecosystems . Ecology Letters, 27 (7) http://dx.doi.org/10.1111/ele.14469
  • Gross, Collin P. ; Duffy, J. E. ; Hovel, Kevin A. ; Reynolds, Pamela L. ; Boström, Christoffer ; Boyer, Katharyn E. ; Cusson, Mathieu ; Eklöf, Johan ; Engelen, Aschwin H. ; Eriksson, Britas Klemens ; Fodrie, F. J. ; Griffin, John N. ; Hereu, Clara M. ; Hori, Masakazu ; Hughes, A. R. ; Ivanov, Mikhail V. ; Jorgensen, Pablo ; Kardish, Melissa R. ; Kruschel, Claudia ; Lee, Kun‐Seop ; Lefcheck, Jonathan ; McGlathery, Karen ; Moksnes, Per‐Olav ; Nakaoka, Masahiro ; O'Connor, Mary I. ; O'Connor, Nessa E. ; Olsen, Jeanine L. ; Orth, Robert J. ; Peterson, Bradley J. ; Reiss, Henning ; Rossi, Francesca ; Ruesink, Jennifer ; Sotka, Erik E. ; Thormar, Jonas ; Tomas, Fiona ; Unsworth, Richard ; Voigt, Erin P. ; Whalen, Matthew A. ; Ziegler, Shelby L. ; Stachowicz, John J.. (2024). A Latitudinal Cline in the Taxonomic Structure of Eelgrass Epifaunal Communities is Associated With Plant Genetic Diversity . Global Ecology and Biogeography, http://dx.doi.org/10.1111/geb.13918
  • Aoki, Lillian R. ; Yang, Bo ; Graham, Olivia J. ; Gomes, Carla ; Rappazzo, Brendan ; Hawthorne, Timothy L. ; Duffy, J. Emmett ; Harvell, Drew. (2023). UAV High-Resolution Imaging and Disease Surveys Combine to Quantify Climate-Related Decline in Seagrass Meadows . Oceanography, 36 (1) , . http://dx.doi.org/10.5670/oceanog.2023.s1.12
  • Brandl, Simon J. ; Weigt, Lee A. ; Pitassy, Diane E. ; Coker, Darren J. ; Patrick, Christopher J. ; Luchese, Matheus H. ; Berumen, Michael L. ; Buskey, Edward J. ; Casey, Jordan M. ; Di Domenico, Maikon ; Soeth, Marcelo ; Topor, Zachary M. ; Duffy, J. Emmett ; Baldwin, Carole C. ; Hagedorn, Mary ; Parenti, Lynne R. (2023). Using standardized fish-specific autonomous reef monitoring structures (FARMS) to quantify cryptobenthic fish communities . Methods in Ecology and Evolution, http://dx.doi.org/10.1111/2041-210X.14085
  • Gonzalez, Andrew ; Vihervaara, Petteri ; Balvanera, Patricia ; Bates, Amanda E. ; Bayraktarov, Elisa ; Bellingham, Peter J. ; Bruder, Andreas ; Campbell, Jillian ; Catchen, Michael D. ; Cavender-Bares, Jeannine ; Chase, Jonathan ; Coops, Nicholas ; Costello, Mark J. ; Czúcz, Bálint ; Delavaud, Aurélie ; Dornelas, Maria ; Dubois, Grégoire ; Duffy, Emmett J. ; Eggermont, Hilde ; Fernandez, Miguel ; Fernandez, Nestor ; Ferrier, Simon ; Geller, Gary N. ; Gill, Michael ; Gravel, Dominique ; Guerra, Carlos A. ; Guralnick, Robert ; Harfoot, Michael ; Hirsch, Tim ; Hoban, Sean ; Hughes, Alice C. ; Hugo, Wim ; Hunter, Margaret E. ; Isbell, Forest ; Jetz, Walter ; Juergens, Norbert ; Kissling, W. D. ; Krug, Cornelia B. ; Kullberg, Peter ; Le Bras, Yvan ; Leung, Brian ; Londoño-Murcia, Maria Cecilia ; Lord, Jean-Michel ; Loreau, Michel ; Luers, Amy ; Ma, Keping ; MacDonald, Anna J. ; Maes, Joachim ; McGeoch, Melodie ; Mihoub, Jean Baptiste ; Millette, Katie L. ; Molnar, Zsolt ; Montes, Enrique ; Mori, Akira S. ; Muller-Karger, Frank ; Muraoka, Hiroyuki ; Nakaoka, Masahiro ; Navarro, Laetitia ; Newbold, Tim ; Niamir, Aidin ; Obura, David ; O’Connor, Mary ; Paganini, Marc ; Pelletier, Dominique ; Pereira, Henrique ; Poisot, Timothée ; Pollock, Laura J. ; Purvis, Andy ; Radulovici, Adriana ; Rocchini, Duccio ; Roeoesli, Claudia ; Schaepman, Michael ; Schaepman-Strub, Gabriela ; Schmeller, Dirk S. ; Schmiedel, Ute ; Schneider, Fabian D. ; Shakya, Mangal Man ; Skidmore, Andrew ; Skowno, Andrew L. ; Takeuchi, Yayioi ; Tuanmu, Mao-Ning ; Turak, Eren ; Turner, Woody ; Urban, Mark C. ; Urbina-Cardona, Nicol ; Valbuena, Ruben ; Van De Putte, Anton ; Van Havre, Basile ; Wingate, Vladimir Ruslan ; Wright, Elaine ; Torrelio, Carlos Zambrana. (2023). Author Correction: A global biodiversity observing system to unite monitoring and guide action . Nature Ecology & Evolution, http://dx.doi.org/10.1038/s41559-023-02263-x
  • Yan, Helen F. ; Casey, Jordan M. ; Knowlton, Nancy ; Duffy, J. Emmett ; Brandl, Simon J. (2023). Examining the diversity, stability and functioning of marine fish communities across a latitudinal gradient . Global Ecology and Biogeography, 32 (1) , 166-177. http://dx.doi.org/10.1111/geb.13611
  • Yang, Bo ; Hawthorne, Timothy L. ; Aoki, Lillian ; Beatty, Deanna S. ; Copeland, Tyler ; Domke, Lia K. ; Eckert, Ginny L. ; Gomes, Carla P. ; Graham, Olivia J. ; Harvell, C. Drew ; Hovel, Kevin A. ; Hessing‐Lewis, Margot ; Harper, Leah ; Mueller, Ryan S. ; Rappazzo, Brendan ; Reshitnyk, Luba ; Stachowicz, John J. ; Tomas, Fiona ; Duffy, J. Emmett. (2023). Low-Altitude UAV Imaging Accurately Quantifies Eelgrass Wasting Disease From Alaska to California . Geophysical Research Letters, 50 (4) http://dx.doi.org/10.1029/2022GL101985
  • Yu, Lei ; Khachaturyan, Marina ; Matschiner, Michael ; Healey, Adam ; Bauer, Diane ; Cameron, Brenda ; Cusson, Mathieu ; Duffy, J. E. ; Joel Fodrie, F. ; Gill, Diana ; Grimwood, Jane ; Hori, Masakazu ; Hovel, Kevin ; Hughes, A. R. ; Jahnke, Marlene ; Jenkins, Jerry ; Keymanesh, Keykhosrow ; Kruschel, Claudia ; Mamidi, Sujan ; Menning, Damian M. ; Moksnes, Per-Olav ; Nakaoka, Masahiro ; Pennacchio, Christa ; Reiss, Katrin ; Rossi, Francesca ; Ruesink, Jennifer L. ; Schultz, Stewart T. ; Talbot, Sandra ; Unsworth, Richard ; Ward, David H. ; Dagan, Tal ; Schmutz, Jeremy ; Eisen, Jonathan A. ; Stachowicz, John J. ; Van De Peer, Yves ; Olsen, Jeanine L. ; Reusch, Thorsten B. H.. (2023). Ocean current patterns drive the worldwide colonization of eelgrass (Zostera marina) . Nature Plants, http://dx.doi.org/10.1038/s41477-023-01464-3
  • Aoki, Lillian R. ; Rappazzo, Brendan ; Beatty, Deanna S. ; Domke, Lia K. ; Eckert, Ginny L. ; Eisenlord, Morgan E. ; Graham, Olivia J. ; Harper, Leah ; Hawthorne, Timothy L. ; Hessing-Lewis, Margot ; Hovel, Kevin A. ; Monteith, Zachary L. ; Mueller, Ryan S. ; Olson, Angeleen M. ; Prentice, Carolyn ; Stachowicz, John J. ; Tomas, Fiona ; Yang, Bo ; Duffy, J. Emmett ; Gomes, Carla ; Harvell, C. Drew. (2022). Disease surveillance by artificial intelligence links eelgrass wasting disease to ocean warming across latitudes . Limnology and Oceanography, http://dx.doi.org/10.1002/lno.12152
  • Ashton, Gail V. ; Freestone, Amy L. ; Duffy, J. Emmett ; Torchin, Mark E. ; Sewall, Brent J. ; Tracy, Brianna ; Albano, Mariano ; Altieri, Andrew H. ; Altvater, Luciana ; Bastida-Zavala, Rolando ; Bortolus, Alejandro ; Brante, Antonio ; Bravo, Viviana ; Brown, Norah ; Buschmann, Alejandro H. ; Buskey, Edward ; Barrera, Rosita Calderón ; Cheng, Brian ; Collin, Rachel ; Coutinho, Ricardo ; De Gracia, Luis ; Dias, Gustavo M. ; DiBacco, Claudio ; Flores, Augusto A. V. ; Haddad, Maria Angélica ; Hoffman, Zvi ; Erquiaga, Bruno Ibañez ; Janiak, Dean ; Campeán, Analí Jiménez ; Keith, Inti ; Leclerc, Jean-Charls ; Lecompte-Pérez, Orlando Pedro ; Longo, Guilherme Ortigara ; Matthews-Cascon, Helena ; McKenzie, Cynthia H. ; Miller, Jessica ; Munizaga, Martín ; Naval-Xavier, Lais P. D. ; Navarrete, Sergio A. ; Otálora, Carlos ; Palomino-Alvarez, Lilian A. ; Palomo, Maria Gabriela ; Patrick, Chris ; Pegau, Cormack ; Pereda, Sandra V. ; Rocha, Rosana M. ; Rumbold, Carlos ; Sánchez, Carlos ; Sanjuan-Muñoz, Adolfo ; Schlöder, Carmen ; Schwindt, Evangelina ; Seemann, Janina ; Shanks, Alan ; Simoes, Nuno ; Skinner, Luis ; Suárez-Mozo, Nancy Yolimar ; Thiel, Martin ; Valdivia, Nelson ; Velez-Zuazo, Ximena ; Vieira, Edson A. ; Vildoso, Bruno ; Wehrtmann, Ingo S. ; Whalen, Matt ; Wilbur, Lynn ; Ruiz, Gregory M. (2022). Predator control of marine communities increases with temperature across 115 degrees of latitude . Science, 376 (6598) , 1215-1219. http://dx.doi.org/10.1126/science.abc4916
  • Beatty, Deanna S. ; Aoki, Lillian R. ; Rappazzo, Brendan ; Bergman, Chelsea ; Domke, Lia K. ; Duffy, J. Emmett ; Dubois, Katie ; Eckert, Ginny L. ; Gomes, Carla ; Graham, Olivia J. ; Harper, Leah ; Harvell, C. Drew ; Hawthorne, Timothy L. ; Hessing-Lewis, Margot ; Hovel, Kevin ; Monteith, Zachary L. ; Mueller, Ryan S. ; Olson, Angeleen M. ; Prentice, Carolyn ; Tomas, Fiona ; Yang, Bo ; Stachowicz, John J. (2022). Predictable Changes in Eelgrass Microbiomes with Increasing Wasting Disease Prevalence across 23 degrees Latitude in the Northeastern Pacific . Msystems, http://dx.doi.org/10.1128/msystems.00224-22
  • Canonico, Gabrielle ; Duffy, J. Emmett ; Muller-Karger, Frank E. (2022). Marine Life 2030: Building Global Knowledge of Marine Life for Local Action in the Ocean Decade . Marine Technology Society Journal, 56 (3) , 112-112. http://dx.doi.org/10.4031/MTSJ.56.3.15
  • Chak, Solomon T. C. ; Harris, Stephen E. ; Hultgren, Kristin M. ; Duffy, J. Emmett ; Rubenstein, Dustin R. (2022). Demographic inference provides insights into the extirpation and ecological dominance of eusocial snapping shrimps . Journal of Heredity, http://dx.doi.org/10.1093/jhered/esac035
  • Duffy, J. Emmett ; Stachowicz, John J. ; Reynolds, Pamela L. ; Hovel, Kevin A. ; Jahnke, Marlene ; Sotka, Erik E. ; Boström, Christoffer ; Boyer, Katharyn E. ; Cusson, Mathieu ; Eklöf, Johan ; Engelen, Aschwin H. ; Eriksson, Britas Klemens ; Fodrie, F. J. ; Griffin, John N. ; Hereu, Clara M. ; Hori, Masakazu ; Hughes, A. R. ; Ivanov, Mikhail V. ; Jorgensen, Pablo ; Kruschel, Claudia ; Lee, Kun-Seop ; Lefcheck, Jonathan S. ; Moksnes, Per-Olav ; Nakaoka, Masahiro ; O'Connor, Mary I. ; O'Connor, Nessa E. ; Orth, Robert J. ; Peterson, Bradley J. ; Reiss, Henning ; Reiss, Katrin ; Richardson, J. P. ; Rossi, Francesca ; Ruesink, Jennifer L. ; Schultz, Stewart T. ; Thormar, Jonas ; Tomas, Fiona ; Unsworth, Richard ; Voigt, Erin ; Whalen, Matthew A. ; Ziegler, Shelby L. ; Olsen, Jeanine L. (2022). A Pleistocene legacy structures variation in modern seagrass ecosystems . Proceedings of the National Academy of Sciences of the United States of America, 119 (32) http://dx.doi.org/10.1073/pnas.2121425119
  • Gross, Collin P. ; Duffy, J. Emmett ; Hovel, Kevin A. ; Kardish, Melissa R. ; Reynolds, Pamela L. ; Bostrom, Christoffer ; Boyer, Katharyn E. ; Cusson, Mathieu ; Eklof, Johan ; Engelen, Aschwin H. ; Eriksson, Britas Klemens ; Fodrie, F. Joel ; Griffin, John N. ; Hereu, Clara M. ; Hori, Masakazu ; Hughes, A. Randall ; Ivanov, Mikhail V. ; Jorgensen, Pablo ; Kruschel, Claudia ; Lee, Kun-Seop ; Lefcheck, Jonathan ; McGlathery, Karen ; Moksnes, Per-Olav ; Nakaoka, Masahiro ; O'Connor, Mary I. ; O'Connor, Nessa E. ; Olsen, Jeanine L. ; Orth, Robert J. ; Peterson, Bradley J. ; Reiss, Henning ; Rossi, Francesca ; Ruesink, Jennifer ; Sotka, Erik E. ; Thormar, Jonas ; Tomas, Fiona ; Unsworth, Richard ; Voigt, Erin P. ; Whalen, Matthew A. ; Ziegler, Shelby L. ; Stachowicz, John J. (2022). The biogeography of community assembly: latitude and predation drive variation in community trait distribution in a guild of epifaunal crustaceans . Proceedings of the Royal Society B: Biological Sciences, 289 (1969) http://dx.doi.org/10.1098/rspb.2021.1762

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